miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|188423143|gb|EY847872.1|EY847872 CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACTAAAACTGCATAATGCATATACATTAAATAAGCAATTAATTAATGTTG
TAGCTGCAGCTAGCTGGCTGGTTAAATTAAGGAGAGAAAACAAATTAAATAAAGCTTAATTGTAAACTAAAGAGTTTTAT
GGACCTCTAAGTCCCAGCTAGAGAGCACACTTATAACTTAAGCAAACACAAAGAAAAGATTTTGTATAGCATCATGAGCA
ATCAGCCTTATATTTTTAGCAAAGTGACTGCTCATGATGTTATATCGATTCATCTTCTCAATGCCTATATAAGTGGGCTG
CCGTTAATAACTCTATTCATCCGTCTACCGGAGACCTCCCCCGCCGAGAGCCGGTGCCCAATAATCTGCCCCGTTGTCGC
TCCCAACTTGCAGCGTGCATGATACTGGAACCAGACACAGCCCTCTGCTCCTTAAGCTTTTCTTTACTTCTTCTTGGGAT
TCCTGATGATCACAAGTTCCTTTCCTCTTCATGCAGTTGCCATTCCACAGCTGACCAGGGTCTTCCGGAAATATACAATT
CCTCTCCCCTTGAACGGGGGGCTGGGAAGTTTGTTGTTGCCTCTTAGCTGGTGATCCCCCACTGCCCCAGTACGGGAAGT
TGGAGGGCCCCAATTTTACTCCGGCAGAAATTTAATGGTACCCAATTGGCTTTAAAAAAAAAATGAAAGTGGGGGTCGTC
TTTTTCCAAATTGAAAAAAAAATCTGGAGGAAAAACGG




Most similar to sp|Q8S3D1|BH068_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q8S3D1|BH068_ARATH Transcription factor bHLH68 OS=Arabidopsis
           thaliana GN=BHLH68 PE=2 SV=2
          Length = 407

 Score =  127 bits (319), Expect = 8e-29
 Identities = 63/98 (64%), Positives = 73/98 (74%), Gaps = 4/98 (4%)
 Frame = -1

Query: 635 PYWGSGGSPAKRQQQTSQPPVQGERNCIFPEDPGQLWNGNCMKRKG----TCDHQESQEE 468
           PY+G+  S   R QQ     +QG+R+CIFPEDPGQL N  CMKR+G    + D+Q + EE
Sbjct: 312 PYFGTTASGNMRHQQH----LQGDRSCIFPEDPGQLVNDQCMKRRGASSSSTDNQNASEE 367

Query: 467 VKKSLRSRGLCLVPVSCTLQVGSDNGADYWAPALGGGG 354
            KK LRSRGLCLVP+SCTLQVGSDNGADYWAPALG  G
Sbjct: 368 PKKDLRSRGLCLVPISCTLQVGSDNGADYWAPALGSAG 405